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SRX1668615: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Montevideo by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 3.1M spots, 1.4G bases, 841Mb downloads

External Id: EXT00177101
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Foodborne Pathgen Survey
PRJNA161665 • SRP012635 • All experiments • All runs
show Abstracthide Abstract
Genome sequencing project
Sample: Salmonella enterica subsp. enterica serovar Montevideo str. 609458-2
SAMN00990767 • SRS311987 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Montevideo str. 609458-2
Library:
Name: Salmonella enterica subsp. enterica serovar Montevideo Nextera XT shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Montevideo.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.8.5
demultiplexer10MiSeq Reporter2.3
Runs: 1 run, 3.1M spots, 1.4G bases, 841Mb
Run# of Spots# of BasesSizePublished
SRR33094973,054,4721.4G841Mb2016-03-29

ID:
2394383

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